CaMutQC: Cancer Somatic Mutation Quality Control9 months ago
Introduction | Citation | Installation | Via Bioconductor (recommended) | Via GitHub | An Overview | Input File | Single VCF | Multiple VCF | From VCF to MAF | Common filtering strategies | Single filtration function | Sequencing quality filtration | Strand of Bias filtration | Adjacent indel filtration | Normal depth filtration | Panel of Normals filtration | Database filtration | Variant type filtration | Region selection | Overall filtration | Potential artifacts filtration | Candidate variant selection | Combined function: mutFilerCom | Filter report | TMB calculation | Customized filtration | Cancer type-based filtration | Reference-based filtration | Mutational analysis | Union strategy | Call strategy set by your name | SessionInfo | Reference
